An AGM to oversee the changing of the guard at the Royal Australasian College of Physicians will go ahead on Friday, following a series of agreements before the NSW Supreme Court today.

The AGM will see the appointment of six new board directors, including a new president-elect, Melbourne paediatrician Dr Julian Kelly.

The court agreements mean current president Professor Jennifer Martin, who was voted out by members in a controversial EGM last month, will not be involved.

It marks the end of her turbulent presidency.